STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_A2682Serine/threonine protein phosphatase. (258 aa)    
Predicted Functional Partners:
h16_A2694
Serine/threonine protein kinase; Deleted EC_number 2.7.1.37.
 
 0.893
h16_A0884
Conserved hypothetical protein; Chain a intracellular ser/thr protein kinase domain.
 
 
 0.887
h16_A0951
Serine/threonine protein kinase.
 
 
 0.880
pdhL
Dihydrolipoamide dehydrogenase (E3) component ofpyruvate dehydrogenase.
  
 0.868
fmt
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
   0.717
h16_B1641
Formyl transferase.
  
   0.717
h16_A2222
Conserved hypothetical protein.
 
  
 0.711
h16_A3531
Ca2+ sensor (EF-Hand superfamily).
    
 0.707
h16_B1628
Hypothetical protein.
    
 0.707
glpF
Glycerol uptake facilitator or related permease; 6 TMHs; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
 
 0.700
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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