STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gnl1Gluconolactonase. (302 aa)    
Predicted Functional Partners:
gnl2
Gluconolactonase.
  
  
 
0.927
h16_A2586
Lactate dehydrogenase or related dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.916
gntK
Gluconate kinase.
    
 0.913
gnl3
Gluconolactonase.
  
  
 
0.910
h16_A3010
Cytochrome b561 / ferric reductase transmembranedomain; 5 TMHs.
     
 0.872
h16_B0324
Fumarylacetoacetate hydrolase.
 
   
 0.857
h16_B0217
L-Alanine-DL-glutamate epimerase or related enzyme of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
 0.749
h16_B1219
Metal-dependent amidohydrolase.
 
   
 0.717
h16_B0322
Aldehyde dehydrogenase, NAD-dependent.
 
  
 0.703
h16_B0130
2,5-dioxovalerate dehydrogenase/2-oxoglutarate semialdehyde dehydrogenase.
 
  
 0.698
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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