STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_A3624General stress protein 17O. (157 aa)    
Predicted Functional Partners:
h16_A3625
Predicted alpha/beta hydrolase BEM46.
       0.765
h16_A3623
Zn-dependent hydrolase / glyoxylase.
     
 0.698
h16_A3108
Metalloregulation DNA-binding stress protein; Belongs to the Dps family.
  
  
 0.547
sdaA
L-Serine ammonia-lyase; Belongs to the iron-sulfur dependent L-serine dehydratase family.
       0.534
h16_B2201
Conserved hypothetical protein.
   
  
 0.521
h16_B0585
Conserved hypothetical protein; Function unknown; Belongs to the UPF0337 (CsbD) family.
  
  
 0.513
h16_A3626
Hypothetical protein.
       0.478
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
       0.455
prkA
Serine protein kinase; Deleted EC_number 2.7.1.37.
   
  
 0.433
h16_A3186
Aldehyde reductase, related to diketogulonate reductase.
  
  
 0.427
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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