Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
h16_A1568 | h16_B0304 | H16_A1568 | H16_B0304 | Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | Quinone oxidoreductase. | 0.504 |
h16_A1577 | h16_B0304 | H16_A1577 | H16_B0304 | Acyl carrier protein phosphodiesterase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | Quinone oxidoreductase. | 0.636 |
h16_A2714 | h16_B0304 | H16_A2714 | H16_B0304 | Pirin-related protein; Belongs to the pirin family. | Quinone oxidoreductase. | 0.681 |
h16_B0304 | h16_A1568 | H16_B0304 | H16_A1568 | Quinone oxidoreductase. | Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.504 |
h16_B0304 | h16_A1577 | H16_B0304 | H16_A1577 | Quinone oxidoreductase. | Acyl carrier protein phosphodiesterase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | 0.636 |
h16_B0304 | h16_A2714 | H16_B0304 | H16_A2714 | Quinone oxidoreductase. | Pirin-related protein; Belongs to the pirin family. | 0.681 |
h16_B0304 | h16_B0305 | H16_B0304 | H16_B0305 | Quinone oxidoreductase. | Oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.778 |
h16_B0304 | h16_B0306 | H16_B0304 | H16_B0306 | Quinone oxidoreductase. | Hypothetical protein. | 0.737 |
h16_B0304 | h16_B0307 | H16_B0304 | H16_B0307 | Quinone oxidoreductase. | Conserved hypothetical protein. | 0.737 |
h16_B0304 | h16_B1745 | H16_B0304 | H16_B1745 | Quinone oxidoreductase. | Zinc-type alcohol dehydrogenase adhd (aldehyde reductase). | 0.496 |
h16_B0304 | nhaP | H16_B0304 | H16_A2773 | Quinone oxidoreductase. | NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain; 11 TMHs. | 0.493 |
h16_B0304 | nuoF | H16_B0304 | H16_A1055 | Quinone oxidoreductase. | NADH dehydrogenase chain F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.540 |
h16_B0304 | qcrB | H16_B0304 | H16_A3397 | Quinone oxidoreductase. | Ubiquinol-cytochrome-c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.633 |
h16_B0305 | h16_B0304 | H16_B0305 | H16_B0304 | Oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Quinone oxidoreductase. | 0.778 |
h16_B0305 | h16_B0306 | H16_B0305 | H16_B0306 | Oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein. | 0.773 |
h16_B0305 | h16_B0307 | H16_B0305 | H16_B0307 | Oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Conserved hypothetical protein. | 0.773 |
h16_B0306 | h16_B0304 | H16_B0306 | H16_B0304 | Hypothetical protein. | Quinone oxidoreductase. | 0.737 |
h16_B0306 | h16_B0305 | H16_B0306 | H16_B0305 | Hypothetical protein. | Oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.773 |
h16_B0306 | h16_B0307 | H16_B0306 | H16_B0307 | Hypothetical protein. | Conserved hypothetical protein. | 0.800 |
h16_B0307 | h16_B0304 | H16_B0307 | H16_B0304 | Conserved hypothetical protein. | Quinone oxidoreductase. | 0.737 |
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