STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
poxFPhenol hydroxylase P5 protein. (355 aa)    
Predicted Functional Partners:
poxE
Phenol hydroxylase P4 protein.
 
  
 0.992
poxD
Phenol hydroxylase P3 protein.
 
  
 0.991
poxB
Phenol hydroxylase P1 protein.
 
  
 0.989
poxC
Phenol hydroxylase P2 protein.
 
  
 0.989
h16_B0546
Catechol 2,3-dioxygenase.
 
  
  0.988
poxA
Phenol hydroxylase P0 protein.
    
 0.948
poxG
2Fe-2S ferredoxin.
 
     0.946
benD
Cis-1,2-dihydroxycyclohexa-3 5-diene-1-carboxylate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
  0.944
pcaH2
Protocatechuate 3,4-dioxygenase beta subunit.
    
 0.905
catA
Catechol 1,2-dioxygenase.
    
 0.905
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.