STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_B0730Ring-hydroxylating dioxygenase. (353 aa)    
Predicted Functional Partners:
h16_B0732
Conserved hypothetical protein.
 
  
 0.939
h16_B0731
Beta-ketoacyl-ACP reductase.
  
 0.928
h16_B0738
Predicted ring-cleavage extradiol dioxygenase.
 
  
 0.915
h16_B0735
Acetolactate synthase large subunit; Belongs to the TPP enzyme family.
 
     0.908
h16_B0736
Predicted dinucleotide-utilizing enzyme; Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate.
 
    0.908
h16_B0729
Conserved hypothetical protein.
 
    0.901
h16_B0734
Beta-ketoacyl-ACP reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.899
h16_B0728
Predicted hydrolase/acyltransferase (alpha/beta-hydrolase superfamily).
 
 
 0.802
benB
Benzoate 1,2-dioxygenase hydroxylase component,beta subunit.
 
 
 0.787
h16_B0733
Transcriptional regulator, IclR-family.
 
  
 0.766
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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