Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
fabF | h16_B1003 | H16_A2565 | H16_B1003 | 3-Oxoacyl-(acyl-carrier-protein) synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | NADP-dependent quinone oxidoreductase. | 0.843 |
h16_B1002 | h16_B1003 | H16_B1002 | H16_B1003 | Transcriptional regulator, AraC-family. | NADP-dependent quinone oxidoreductase. | 0.565 |
h16_B1002 | h16_B1004 | H16_B1002 | H16_B1004 | Transcriptional regulator, AraC-family. | Alpha-ketoglutarate-dependent taurine dioxygenase. | 0.629 |
h16_B1002 | h16_B1005 | H16_B1002 | H16_B1005 | Transcriptional regulator, AraC-family. | Conserved hypothetical protein; Function unknown. | 0.562 |
h16_B1003 | fabF | H16_B1003 | H16_A2565 | NADP-dependent quinone oxidoreductase. | 3-Oxoacyl-(acyl-carrier-protein) synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.843 |
h16_B1003 | h16_B1002 | H16_B1003 | H16_B1002 | NADP-dependent quinone oxidoreductase. | Transcriptional regulator, AraC-family. | 0.565 |
h16_B1003 | h16_B1004 | H16_B1003 | H16_B1004 | NADP-dependent quinone oxidoreductase. | Alpha-ketoglutarate-dependent taurine dioxygenase. | 0.755 |
h16_B1003 | h16_B1005 | H16_B1003 | H16_B1005 | NADP-dependent quinone oxidoreductase. | Conserved hypothetical protein; Function unknown. | 0.671 |
h16_B1003 | h16_B1006 | H16_B1003 | H16_B1006 | NADP-dependent quinone oxidoreductase. | Probable extra-cytoplasmic solute receptor. | 0.402 |
h16_B1004 | h16_B1002 | H16_B1004 | H16_B1002 | Alpha-ketoglutarate-dependent taurine dioxygenase. | Transcriptional regulator, AraC-family. | 0.629 |
h16_B1004 | h16_B1003 | H16_B1004 | H16_B1003 | Alpha-ketoglutarate-dependent taurine dioxygenase. | NADP-dependent quinone oxidoreductase. | 0.755 |
h16_B1004 | h16_B1005 | H16_B1004 | H16_B1005 | Alpha-ketoglutarate-dependent taurine dioxygenase. | Conserved hypothetical protein; Function unknown. | 0.728 |
h16_B1004 | h16_B1006 | H16_B1004 | H16_B1006 | Alpha-ketoglutarate-dependent taurine dioxygenase. | Probable extra-cytoplasmic solute receptor. | 0.414 |
h16_B1005 | h16_B1002 | H16_B1005 | H16_B1002 | Conserved hypothetical protein; Function unknown. | Transcriptional regulator, AraC-family. | 0.562 |
h16_B1005 | h16_B1003 | H16_B1005 | H16_B1003 | Conserved hypothetical protein; Function unknown. | NADP-dependent quinone oxidoreductase. | 0.671 |
h16_B1005 | h16_B1004 | H16_B1005 | H16_B1004 | Conserved hypothetical protein; Function unknown. | Alpha-ketoglutarate-dependent taurine dioxygenase. | 0.728 |
h16_B1005 | h16_B1006 | H16_B1005 | H16_B1006 | Conserved hypothetical protein; Function unknown. | Probable extra-cytoplasmic solute receptor. | 0.508 |
h16_B1006 | h16_B1003 | H16_B1006 | H16_B1003 | Probable extra-cytoplasmic solute receptor. | NADP-dependent quinone oxidoreductase. | 0.402 |
h16_B1006 | h16_B1004 | H16_B1006 | H16_B1004 | Probable extra-cytoplasmic solute receptor. | Alpha-ketoglutarate-dependent taurine dioxygenase. | 0.414 |
h16_B1006 | h16_B1005 | H16_B1006 | H16_B1005 | Probable extra-cytoplasmic solute receptor. | Conserved hypothetical protein; Function unknown. | 0.508 |