STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_B1953(2-aminoethyl) phosphonate--pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily. (377 aa)    
Predicted Functional Partners:
h16_B1947
Glyceraldehyde-3 dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 0.957
h16_B0833
NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 0.949
h16_B1952
ABC-type transporter, duplicated permease domains; 12 TMHs.
 
     0.915
h16_B1948
Phosphonoacetate hydrolase.
 
   
 0.910
h16_B1950
ABC-type transporter, periplasmic component.
 
  
 0.893
phnA
Phosphonoacetate hydrolase.
 
   
 0.879
gcvT3
Glycine cleavage system T protein; Belongs to the GcvT family.
 
 
 0.834
h16_B0111
ABC-type transporter, periplasmic component: BITfamily.
 
  
 0.814
h16_B1951
ABC-type transporter, ATPase component: CUT1 family; Belongs to the ABC transporter superfamily.
 
     0.797
h16_B0110
ABC-type transporter, duplicated permease domains; 12 TMHs.
 
     0.777
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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