STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_B2158Acyl-CoA dehydrogenase. (379 aa)    
Predicted Functional Partners:
h16_B0664
Acyl-CoA dehydrogenase.
 
     0.960
h16_B2157
Acyl-CoA dehydrogenase.
     0.947
h16_B2156
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.870
h16_B0721
Acyl-CoA dehydrogenase.
 
    
0.841
h16_A1068
Acyl-CoA dehydrogenase.
 
     0.831
h16_A0863
Acyl-CoA dehydrogenase.
 
     0.817
h16_B0706
Acyl dehydratase.
 
 0.813
pimD
Pimeloyl-CoA dehydrogenase (small subunit).
 
     0.806
h16_B0703
Acyl-CoA dehydrogenase.
     0.798
h16_B0380
Acetyl-CoA acetyltransferase.
     0.758
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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