STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fnod_0093PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: tma:TM0467 regulatory protein, putative. (464 aa)    
Predicted Functional Partners:
Fnod_1231
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: tpt:Tpet_1352 anti-sigma-factor antagonist.
 
 
 0.915
Fnod_1277
KEGG: tdn:Tmden_0219 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
  
 0.899
Fnod_0792
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: gur:Gura_2044 anti-sigma-factor antagonist.
 
 
 0.887
Fnod_0219
TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; PAS fold-4 domain protein; SMART: protein phosphatase 2C domain protein; KEGG: aba:Acid345_1960 diguanylate cyclase with PAS/PAC sensor.
 
 
 0.868
Fnod_1087
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: tma:TM0733 sigma-B regulator, putative.
 
 
 0.831
Fnod_0092
PFAM: response regulator receiver; KEGG: tma:TM0468 response regulator.
  
    0.798
Fnod_0091
KEGG: tpt:Tpet_0451 uncharacterized protein-like protein.
       0.791
Fnod_0791
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: tma:TM1081 anti-sigma factor antagonist, putative; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.758
Fnod_0999
Response regulator receiver protein; PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: bce:BC1006 sigma factor SigB regulation protein RsbU.
 
 
0.721
Fnod_0090
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM1054 ABC transporter, ATP-binding protein.
       0.683
Your Current Organism:
Fervidobacterium nodosum
NCBI taxonomy Id: 381764
Other names: F. nodosum Rt17-B1, Fervidobacterium nodosum Rt17-B1, Fervidobacterium nodosum str. Rt17-B1, Fervidobacterium nodosum strain Rt17-B1
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