STRINGSTRING
yggA protein (Aeromonas salmonicida) - STRING interaction network
"yggA" - annotation not available in Aeromonas salmonicida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yggAannotation not available (206 aa)    
Predicted Functional Partners:
iciA
HTH-type transcriptional regulator ArgP; Controls the transcription of genes involved in arginine and lysine metabolism (301 aa)
 
   
  0.919
cpdB
annotation not available (659 aa)
              0.535
ASA_0432
annotation not available (205 aa)
   
   
  0.527
ASA_1677
annotation not available (239 aa)
            0.498
asaR
annotation not available (260 aa)
              0.466
ASA_2308
annotation not available (561 aa)
           
  0.434
ASA_0825
annotation not available (553 aa)
           
  0.434
Your Current Organism:
Aeromonas salmonicida
NCBI taxonomy Id: 382245
Other names: A. salmonicida subsp. salmonicida A449, Aeromonas salmonicida, Aeromonas salmonicida subsp. salmonicida A449, Aeromonas salmonicida subsp. salmonicida str. A449, Aeromonas salmonicida subsp. salmonicida strain A449
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