STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY80740.1Hypothetical protein. (70 aa)    
Predicted Functional Partners:
EDY83838.1
Polysulphide reductase, NrfD superfamily; [C] COG5557 Polysulphide reductase.
 
 
 0.992
EDY82330.1
4Fe-4S binding domain protein; [C] COG0437 Fe-S-cluster-containing hydrogenase components 1.
 
 
 0.989
EDY85240.1
Hypothetical protein.
 
 
 0.978
EDY81717.1
Hypothetical protein.
 
 
  0.966
EDY82384.1
Hypothetical protein.
 
 
  0.966
EDY83363.1
[O] COG3278 Cbb3-type cytochrome oxidase, subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 0.958
EDY83839.1
4Fe-4S binding domain protein; [C] COG0437 Fe-S-cluster-containing hydrogenase components 1.
 
 
 0.939
EDY82796.1
Oxidoreductase alpha (molybdopterin) subunit; [C] COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.892
EDY82944.1
[C] COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 0.854
EDY85219.1
[C] COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2.
 
 
 0.833
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.