STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY84583.1[S] COG4102 Uncharacterized protein conserved in bacteria. (464 aa)    
Predicted Functional Partners:
EDY82002.1
Conserved hypothetical protein; [R] COG3291 FOG: PKD repeat.
     0.947
EDY82399.1
[S] COG5267 Uncharacterized protein conserved in bacteria.
     0.805
EDY81426.1
[S] COG5267 Uncharacterized protein conserved in bacteria.
 
     0.782
EDY83729.1
[S] COG5267 Uncharacterized protein conserved in bacteria.
 
     0.778
EDY83395.1
Hypothetical protein.
       0.732
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.