STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcp-3Mcp protein; Methyl-accepting chemotaxis protein mcpB; Function unclear. (673 aa)    
Predicted Functional Partners:
cheA
Histidine kinase; (P29072) Chemotaxis protein cheA (EC 2.7.3.-); High confidence in function and specificity.
 
 0.999
cheV
(P37599) Chemotaxis protein cheV; High confidence in function and specificity.
 
 0.998
cheV-2
Chemotaxis protein cheV; High confidence in function and specificity.
 
 0.998
cheV-3
Chemotaxis signal transduction protein CheV; High confidence in function and specificity.
 
 0.997
cheW
(P07365) Chemotaxis protein cheW, purine-binding chemotaxis protein; Function unclear.
 
 0.996
cheY
CheY response regulator; (P71129) Chemotaxis protein cheY homolog; High confidence in function and specificity.
 
 0.961
tlpB
TlpB protein; High confidence in function and specificity.
  
  
 
0.929
mcp-2
Mcp protein; Methyl-accepting chemotaxis protein; Function unclear.
  
  
 
0.910
fliY
(Q51466) Flagellar motor switch protein fliN; High confidence in function and specificity.
 
 
 0.708
motA
Flagellar motor rotation protein MotA; (P56426) Chemotaxis motA protein (Motility protein A); High confidence in function and specificity.
 
  
 0.602
Your Current Organism:
Helicobacter acinonychis
NCBI taxonomy Id: 382638
Other names: H. acinonychis str. Sheeba, Helicobacter acinonychis Sheeba, Helicobacter acinonychis str. Sheeba, Helicobacter acinonychis strain Sheeba
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