STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101497229Zinc finger protein ZAT5-like. (296 aa)    
Predicted Functional Partners:
LOC101502359
Uncharacterized protein LOC101502359.
   
 0.530
LOC101494456
Probable protein phosphatase 2C 49 isoform X1.
     
 0.476
LOC101504386
Serine/threonine-protein kinase ATG1t; Belongs to the protein kinase superfamily.
   
 
 0.465
LOC101507449
Chromatin structure-remodeling complex protein SYD isoform X1.
    
 0.452
LOC101504422
Protein IQ-DOMAIN 1.
  
     0.443
LOC101510160
Protein BRASSINAZOLE-RESISTANT 1.
  
     0.434
LOC101503078
WAT1-related protein.
  
     0.430
LOC101512944
High mobility group B protein 15.
    
 0.429
LOC101515565
High mobility group B protein 10-like.
    
 0.429
LOC101493959
High mobility group B protein 9.
    
 0.429
Your Current Organism:
Cicer arietinum
NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.