STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101488634B3 domain-containing transcription factor VRN1-like. (434 aa)    
Predicted Functional Partners:
LOC101494965
40S ribosomal protein S29.
   
 0.927
LOC101490142
ubiquitin-60S ribosomal protein L40.
   
 0.910
LOC101495311
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.880
LOC101492856
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.880
LOC101499860
40S ribosomal protein S15-4; Belongs to the universal ribosomal protein uS19 family.
   
 0.879
LOC101511312
40S ribosomal protein S15-4-like; Belongs to the universal ribosomal protein uS19 family.
   
 0.879
LOC101502908
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.877
LOC101513207
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.877
LOC101506164
40S ribosomal protein S11 isoform X2; Belongs to the universal ribosomal protein uS17 family.
   
 0.876
LOC101507753
40S ribosomal protein S11 isoform X1; Belongs to the universal ribosomal protein uS17 family.
   
 0.876
Your Current Organism:
Cicer arietinum
NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.