STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIP87241.1Phosphotransferase enzyme family protein. (420 aa)    
Predicted Functional Partners:
aspS
aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
       0.837
SIP87214.1
Recombination protein MgsA.
       0.825
SIQ62014.1
RecB family nuclease, putative, TM0106 family.
  
     0.771
SIQ47427.1
Septum formation.
  
     0.762
SIQ64486.1
Hypothetical protein.
  
     0.761
SIQ29899.1
Hypothetical protein.
  
     0.760
SIQ05200.1
Hypothetical protein.
  
     0.757
SIQ63899.1
Hypothetical protein.
  
     0.754
SIQ80459.1
Dienelactone hydrolase.
  
    0.753
SIP95629.1
Hypothetical protein.
  
     0.752
Your Current Organism:
Corynebacterium afermentans
NCBI taxonomy Id: 38286
Other names: ATCC 51403, C. afermentans, CCUG 32103, CDC coryneform group ANF-1, CIP 103499, DSM 44280, JCM 10390, LCDC 88199
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.