STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIP96201.1Septum formation protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. (196 aa)    
Predicted Functional Partners:
SIP96227.1
Acyl-CoA carboxylase epsilon subunit.
     
 0.851
SIP96262.1
propionyl-CoA carboxylase beta chain.
     
 0.749
SIQ66004.1
Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
 
     0.718
SIQ09392.1
8-oxo-dGTPase.
      0.690
lipA
Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
   
  
 0.628
SIP95306.1
Fatty acid synthase, bacterial type.
 
 
 
 0.625
lipB
Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.
      
 0.571
SIP96282.1
DNA helicase/exodeoxyribonuclease V, subunit A.
       0.545
SIP96312.1
PD-(D/E)XK nuclease superfamily protein.
       0.529
SIQ14470.1
Cytochrome P450.
     
 0.406
Your Current Organism:
Corynebacterium afermentans
NCBI taxonomy Id: 38286
Other names: ATCC 51403, C. afermentans, CCUG 32103, CDC coryneform group ANF-1, CIP 103499, DSM 44280, JCM 10390, LCDC 88199
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