STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rcas_1466KEGG: rrs:RoseRS_4143 hypothetical protein. (193 aa)    
Predicted Functional Partners:
Rcas_1463
KEGG: rrs:RoseRS_4140 Fe-S-cluster-containing hydrogenase components 1-like protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.999
Rcas_1464
PFAM: Polysulphide reductase NrfD; KEGG: rrs:RoseRS_4141 polysulphide reductase, NrfD.
 
 
 
 0.998
Rcas_1462
KEGG: rrs:RoseRS_4139 hypothetical protein.
 
 
 
 0.996
Rcas_1465
KEGG: rrs:RoseRS_4142 hypothetical protein.
 
   0.996
Rcas_1467
KEGG: rrs:RoseRS_4144 hypothetical protein.
 
 
 0.988
Rcas_3558
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.964
Rcas_3556
PFAM: cytochrome c oxidase subunit III; KEGG: rrs:RoseRS_2265 cytochrome c oxidase, subunit III.
  
 
 0.903
Rcas_2445
Hypothetical protein.
  
 
 0.809
Rcas_1574
Cytochrome c oxidase subunit II; PFAM: blue (type 1) copper domain protein; cytochrome c oxidase subunit II; KEGG: rrs:RoseRS_0933 cytochrome c oxidase, subunit II.
 
 
 0.807
Rcas_1640
KEGG: rrs:RoseRS_1313 hypothetical protein.
   
 
 0.807
Your Current Organism:
Roseiflexus castenholzii
NCBI taxonomy Id: 383372
Other names: R. castenholzii DSM 13941, Roseiflexus castenholzii DSM 13941, Roseiflexus castenholzii HLO8, Roseiflexus castenholzii str. DSM 13941, Roseiflexus castenholzii strain DSM 13941
Server load: low (26%) [HD]