node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rcas_2652 | rplA | Rcas_2652 | Rcas_4319 | KEGG: rrs:RoseRS_1567 hypothetical protein. | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.989 |
Rcas_2652 | rplM | Rcas_2652 | Rcas_3996 | KEGG: rrs:RoseRS_1567 hypothetical protein. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.992 |
Rcas_2652 | rplS | Rcas_2652 | Rcas_2561 | KEGG: rrs:RoseRS_1567 hypothetical protein. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.993 |
Rcas_2652 | rplT | Rcas_2652 | Rcas_1436 | KEGG: rrs:RoseRS_1567 hypothetical protein. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.983 |
Rcas_2652 | rpmA | Rcas_2652 | Rcas_2002 | KEGG: rrs:RoseRS_1567 hypothetical protein. | PFAM: ribosomal protein L27; KEGG: rrs:RoseRS_2696 ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.988 |
Rcas_2652 | rpmF | Rcas_2652 | Rcas_1804 | KEGG: rrs:RoseRS_1567 hypothetical protein. | TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: rrs:RoseRS_2613 ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.987 |
Rcas_2652 | rpsB | Rcas_2652 | Rcas_3925 | KEGG: rrs:RoseRS_1567 hypothetical protein. | PFAM: ribosomal protein S2; KEGG: rrs:RoseRS_2019 ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.985 |
Rcas_2652 | rpsD | Rcas_2652 | Rcas_4000 | KEGG: rrs:RoseRS_1567 hypothetical protein. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.984 |
Rcas_2652 | rpsP | Rcas_2652 | Rcas_1666 | KEGG: rrs:RoseRS_1567 hypothetical protein. | PFAM: ribosomal protein S16; KEGG: rrs:RoseRS_1287 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.978 |
Rcas_2652 | trmD | Rcas_2652 | Rcas_1332 | KEGG: rrs:RoseRS_1567 hypothetical protein. | tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.640 |
rplA | Rcas_2652 | Rcas_4319 | Rcas_2652 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | KEGG: rrs:RoseRS_1567 hypothetical protein. | 0.989 |
rplA | rplM | Rcas_4319 | Rcas_3996 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.997 |
rplA | rplS | Rcas_4319 | Rcas_2561 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.994 |
rplA | rplT | Rcas_4319 | Rcas_1436 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.993 |
rplA | rpmA | Rcas_4319 | Rcas_2002 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | PFAM: ribosomal protein L27; KEGG: rrs:RoseRS_2696 ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.993 |
rplA | rpmF | Rcas_4319 | Rcas_1804 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: rrs:RoseRS_2613 ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.992 |
rplA | rpsB | Rcas_4319 | Rcas_3925 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | PFAM: ribosomal protein S2; KEGG: rrs:RoseRS_2019 ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.994 |
rplA | rpsD | Rcas_4319 | Rcas_4000 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.993 |
rplA | rpsP | Rcas_4319 | Rcas_1666 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | PFAM: ribosomal protein S16; KEGG: rrs:RoseRS_1287 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.994 |
rplA | trmD | Rcas_4319 | Rcas_1332 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.926 |