STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argGPutative argininosuccinate synthase; Function of strongly homologous gene; enzyme; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (405 aa)    
Predicted Functional Partners:
argH
Argininosuccinate lyase (Arginosuccinase) (ASAL); Function of strongly homologous gene; enzyme.
 
 
 0.997
carB
Carbamoyl-phosphate synthase, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the CarB family.
 
 0.990
argI
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
 
 0.986
argF
Ornithine carbamoyltransferase, catabolic; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
  
 
 0.978
argA
N-alpha-acetylglutamate synthase (amino-acid acetyltransferase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.967
PSEEN2650
Putative N-acetylornithine deacetylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 0.963
argE
Acetylornithine deacetylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 0.963
PSEEN0256
Putative carbamoyl-phosphate synthase L chain, ATP-binding; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 
 0.954
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
 0.942
carA
Carbamoyl-phosphate synthase, small chain; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the CarA family.
 
 
 0.938
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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