STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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PSEEN2012Putative outer membrane ferric siderophore receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; receptor. (708 aa)    
Predicted Functional Partners:
PSEEN2749
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
    0.759
tonB
Ferric siderophore transport system, periplasmic binding protein TonB; Function of strongly homologous gene; transporter.
 
 
 0.513
PSEEN2348
Putative TonB-dependent outer membrane receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; receptor.
  
  
 0.510
PSEEN0840
Putative FecR-like transmembrane sensor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
   0.490
PSEEN3619
Putative TonB-dependent receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; receptor.
  
  
 0.484
PSEEN4569
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.475
PSEEN4572
Putative FecR-like transmembrane sensor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
   0.459
PSEEN2107
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 0.446
PSEEN2011
Putative glutathione S-transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.437
PSEEN4421
Putative FecR-like transmembrane sensor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
   0.430
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.