STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSEEN2349Hypothetical protein; No homology to any previously reported sequences. (271 aa)    
Predicted Functional Partners:
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
   0.706
bkdA2
2-oxoisovalerate dehydrogenase, beta subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 0.554
sun
16S rRNA (cytosine967-C5)-methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
 
 0.543
PSEEN2350
Putative acetyltransferase, GNAT family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.504
PSEEN4455
Putative Lipopolysaccharide kinase InaA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
   
 0.476
PSEEN4989
Toluene tolerance protein Ttg8; Function of homologous gene experimentally demonstrated in an other organism; phenotype.
   
 0.476
PSEEN5137
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
 0.476
PSEEN5138
Putative heptose kinase WapQ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
   
 0.476
stk1
Serine-threonine kinase Stk1; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.460
PSEEN1751
Putative bifunctional serine/threonine-protein kinase and phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 
 0.460
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.