STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdtCMultidrug resistance efflux pump; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1036 aa)    
Predicted Functional Partners:
mdtA
Multidrug resistance efflux pump; Function of strongly homologous gene; transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.974
PSEEN2676
Putative outer membrane protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
 0.895
PSEEN0945
Putative multidrug RND transporter, membrane fusion protein (HylD family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.835
mdtB
Multidrug resistance efflux transporter; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   
0.822
PSEEN4758
Putative multidrug RND transporter, membrane fusion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.657
PSEEN1110
Putative multidrug RND transporter, membrane fusion protein (HylD family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.650
mexE
Multidrug efflux RND membrane fusion protein MexE; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.640
PSEEN2970
Putative multidrug efflux RND membrane fusion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.567
PSEEN4241
Putative multidrug RND transporter, membrane fusion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.567
PSEEN5289
Putative multidrug RND transporter, membrane fusion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.560
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
Server load: high (82%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.