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GLYMA0006S50.1 protein (Glycine max) - STRING interaction network
"GLYMA0006S50.1" - Histone deacetylase in Glycine max
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLYMA0006S50.1Histone deacetylase ; Belongs to the histone deacetylase family. HD Type 1 subfamily (497 aa)    
Predicted Functional Partners:
GLYMA20G31871.1
Uncharacterized protein (1664 aa)
     
 
  0.916
GLYMA10G35671.1
Uncharacterized protein (1651 aa)
     
 
  0.916
GLYMA20G26700.2
Uncharacterized protein (820 aa)
     
 
  0.903
GLYMA10G40641.1
Uncharacterized protein (820 aa)
     
 
  0.903
GLYMA13G39935.2
Uncharacterized protein (1871 aa)
     
 
  0.879
GLYMA12G29922.1
Uncharacterized protein (1673 aa)
     
 
  0.879
GLYMA20G32760.1
Uncharacterized protein (111 aa)
     
 
  0.868
GLYMA03G02240.1
Uncharacterized protein (151 aa)
     
 
  0.868
GLYMA08G09090.1
Uncharacterized protein (425 aa)
     
 
  0.840
GLYMA05G26150.7
Uncharacterized protein (425 aa)
     
 
  0.840
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max, Glycine max (L.) Merr., soybean, soybeans
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