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STRINGSTRING
GLYMA01G01010.1 protein (Glycine max) - STRING interaction network
"GLYMA01G01010.1" - Pectinesterase in Glycine max
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLYMA01G01010.1Pectinesterase (379 aa)    
Predicted Functional Partners:
GLYMA05G02890.1
Pectate lyase (406 aa)
 
   
  0.779
GLYMA06G18370.1
Pectate lyase (408 aa)
 
   
  0.776
GLYMA04G36520.1
Pectate lyase (408 aa)
 
   
  0.775
GLYMA11G37610.1
Pectate lyase (402 aa)
 
   
  0.774
GLYMA18G01570.2
Pectate lyase (392 aa)
 
   
  0.773
GLYMA10G24630.1
Pectate lyase (450 aa)
 
   
  0.765
GLYMA08G47161.1
Pectate lyase (451 aa)
 
   
  0.761
GLYMA08G40820.2
Pectate lyase (451 aa)
 
   
  0.755
GLYMA13G05150.1
Pectate lyase (443 aa)
 
   
  0.751
GLYMA09G00850.1
Pectate lyase (397 aa)
 
   
  0.749
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max, Glycine max (L.) Merr., soybean, soybeans
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