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GLYMA01G04970.1 protein (Glycine max) - STRING interaction network
"GLYMA01G04970.1" - Pectate lyase in Glycine max
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLYMA01G04970.1Pectate lyase (448 aa)    
Predicted Functional Partners:
GLYMA15G23310.1
Uncharacterized protein (401 aa)
       
  0.862
GLYMA09G10500.1
Uncharacterized protein (394 aa)
       
  0.862
GLYMA16G01650.1
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin (492 aa)
 
   
  0.812
GLYMA07G02780.1
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin (582 aa)
 
 
  0.768
GLYMA07G02790.1
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin (582 aa)
 
 
  0.767
GLYMA07G02750.1
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin (582 aa)
 
 
  0.767
GLYMA07G03010.1
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin (582 aa)
 
 
  0.767
GLYMA02G13820.1
Uncharacterized protein (369 aa)
 
 
  0.767
GLYMA01G27260.1
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin (576 aa)
 
 
  0.767
GLYMA10G29160.1
Pectinesterase (589 aa)
 
 
  0.766
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max, Glycine max (L.) Merr., soybean, soybeans
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