STRINGSTRING
4CL4 protein (Glycine max) - STRING interaction network
"4CL4" - 4-coumarate--CoA ligase 2 in Glycine max
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
4CL44-coumarate--CoA ligase 2 (555 aa)    
Predicted Functional Partners:
C4H
Trans-cinnamate 4-monooxygenase ; Controls carbon flux to pigments essential for pollination or UV protection, to numerous pytoalexins synthesized by plants when challenged by pathogens, and to lignins (506 aa)
   
 
  0.970
chs8
Uncharacterized protein (389 aa)
   
 
  0.958
c4h1
Uncharacterized protein (505 aa)
   
 
  0.952
GLYMA20G24810.1
Uncharacterized protein (539 aa)
   
 
  0.952
GLYMA16G24341.1
Uncharacterized protein (518 aa)
   
 
  0.952
GLYMA11G07850.1
Uncharacterized protein (521 aa)
   
 
  0.952
GLYMA01G37430.1
Uncharacterized protein (515 aa)
   
 
  0.952
PAL1
Phenylalanine ammonia-lyase 1 ; This is a key enzyme of plant metabolism catalyzing the first reaction in the biosynthesis from L-phenylalanine of a wide variety of natural products based on the phenylpropane skeleton (713 aa)
   
 
  0.946
LOC732575
Chalcone synthase 1 ; The primary product of this enzyme is 4,2’,4’,6’- tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin (388 aa)
   
 
  0.942
PAL2
Phenylalanine ammonia-lyase (717 aa)
   
 
  0.941
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: Fabaceae, Fabales, Faboideae, G. max, Glycine, Glycine max, Glycine max (L.) Merr., Leguminosae, Papilionoideae, Phaseoleae, pea family, soybean, soybeans
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