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ATG5 protein (Glycine max) - STRING interaction network
"ATG5" - Autophagy protein 5 in Glycine max
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATG5Autophagy protein 5; Required for autophagy (350 aa)    
Predicted Functional Partners:
GLYMA07G04250.1
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation (94 aa)
     
  0.995
GLYMA17G13520.2
Uncharacterized protein (514 aa)
     
  0.995
GLYMA05G02850.1
Uncharacterized protein (514 aa)
     
  0.995
GMATG3A
Autophagy-related protein 3 (313 aa)
     
  0.990
GLYMA09G36540.1
Autophagy-related protein 3 (288 aa)
     
  0.990
GLYMA16G00940.2
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation (95 aa)
     
 
  0.979
GLYMA10G03560.2
Uncharacterized protein (3609 aa)
       
 
  0.967
GLYMA02G16260.1
Uncharacterized protein (3605 aa)
       
 
  0.967
GLYMA17G21590.1
Uncharacterized protein (218 aa)
     
 
  0.963
GLYMA17G01650.1
Autophagy-related protein; Belongs to the ATG8 family (119 aa)
       
 
  0.952
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max, Glycine max (L.) Merr., soybean, soybeans
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