• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
GLYMA02G40800.1 protein (Glycine max) - STRING interaction network
"GLYMA02G40800.1" - MYB/HD-like transcription factor in Glycine max
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLYMA02G40800.1MYB/HD-like transcription factor (436 aa)    
Predicted Functional Partners:
GLYMA12G04131.2
Uncharacterized protein (212 aa)
     
   
  0.584
GLYMA11G11850.2
Uncharacterized protein (212 aa)
     
   
  0.584
SIG5A
Sigma-like factor 5A; Uncharacterized protein (512 aa)
     
   
  0.562
GLYMA13G08390.3
Uncharacterized protein (512 aa)
     
   
  0.562
GmSIG5B
Uncharacterized protein (507 aa)
     
   
  0.562
GLYMA04G41691.1
Uncharacterized protein (491 aa)
     
   
  0.562
GLYMA13G19871.1
Uncharacterized protein (755 aa)
     
 
  0.557
GLYMA11G15580.3
Uncharacterized protein (765 aa)
     
 
  0.557
GLYMA10G05520.2
Uncharacterized protein (753 aa)
     
 
  0.557
GLYMA07G07815.1
Uncharacterized protein (424 aa)
     
   
  0.549
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max, Glycine max (L.) Merr., soybean, soybeans
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