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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
LOC548080 protein (Glycine max) - STRING interaction network
"LOC548080" - HMG-Y-related protein A in Glycine max
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC548080HMG-Y-related protein A (176 aa)    
Predicted Functional Partners:
GLYMA02G13250.1
Uncharacterized protein (261 aa)
           
  0.630
GLYMA01G07770.1
Uncharacterized protein (261 aa)
           
  0.630
GLYMA04G06820.1
Uncharacterized protein (647 aa)
           
  0.545
GLYMA15G12100.1
Uncharacterized protein (421 aa)
           
  0.506
GLYMA09G01270.1
Uncharacterized protein (421 aa)
           
  0.506
GLYMA03G20850.1
Uncharacterized protein (204 aa)
           
  0.506
GLYMA17G00550.1
Uncharacterized protein (539 aa)
           
  0.504
GLYMA12G28510.1
Uncharacterized protein (612 aa)
           
  0.504
GLYMA07G40250.1
Uncharacterized protein (567 aa)
           
  0.504
CHR38
Uncharacterized protein (1201 aa)
           
  0.432
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max, Glycine max (L.) Merr., soybean, soybeans
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