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STRINGSTRING
GMN16 protein (Glycine max) - STRING interaction network
"GMN16" - Nodulin-16 in Glycine max
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GMN16Nodulin-16 ; Belongs to the GRP family (109 aa)    
Predicted Functional Partners:
GMN56
Probable 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate). May play an important role in symbiotic nitrogen fixation; Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily (397 aa)
           
  0.712
LBA
Leghemoglobin A; Provides oxygen to the bacteroids. This role is essential for symbiotic nitrogen fixation (144 aa)
           
  0.552
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max, Glycine max (L.) Merr., soybean, soybeans
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