• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
GLYMA04G00280.2 protein (Glycine max) - STRING interaction network
"GLYMA04G00280.2" - Probable alanine--tRNA ligase, chloroplastic in Glycine max
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLYMA04G00280.2Probable alanine--tRNA ligase, chloroplastic; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain; Belongs to the class-II aminoacyl-tRNA synthetase family (963 aa)    
Predicted Functional Partners:
GLYMA07G30983.1
Uncharacterized protein (777 aa)
   
 
  0.982
GLYMA11G03700.4
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family (1125 aa)
   
 
  0.980
GLYMA01G41660.1
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family (1115 aa)
   
 
  0.980
GLYMA12G02330.1
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family (1182 aa)
   
 
  0.980
GLYMA11G09990.1
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family (1182 aa)
   
 
  0.980
GLYMA18G07790.1
Uncharacterized protein (122 aa)
   
 
  0.978
GLYMA08G47890.1
Uncharacterized protein (725 aa)
   
 
  0.978
GLYMA12G02076.2
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family (822 aa)
   
   
  0.976
GLYMA13G10200.1
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family (625 aa)
   
   
  0.955
GLYMA11G07000.1
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family (382 aa)
   
 
  0.955
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max, Glycine max (L.) Merr., soybean, soybeans
Server load: low (6%) [HD]