STRINGSTRING
GLYMA04G00960.1 protein (Glycine max) - STRING interaction network
"GLYMA04G00960.1" - Arginine decarboxylase in Glycine max
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLYMA04G00960.1Arginine decarboxylase (697 aa)    
Predicted Functional Partners:
GLYMA17G14040.1
Uncharacterized protein (338 aa)
   
  0.986
GLYMA01G33761.1
Uncharacterized protein (338 aa)
   
  0.986
AG1
Arginase (350 aa)
   
  0.985
GLYMA17G09090.3
Uncharacterized protein (376 aa)
       
  0.973
GLYMA12G01500.1
Uncharacterized protein (557 aa)
         
    0.900
GLYMA09G35850.1
Uncharacterized protein (554 aa)
         
    0.900
GLYMA01G33635.1
Uncharacterized protein (253 aa)
   
  0.861
GLYMA06G10130.1
Uncharacterized protein (516 aa)
         
  0.860
GLYMA04G10100.1
Uncharacterized protein (512 aa)
         
  0.860
LOC548071
Arginine decarboxylase (691 aa)
   
   
 
0.801
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: Fabaceae, Fabales, Faboideae, G. max, Glycine, Glycine max, Glycine max (L.) Merr., Leguminosae, Papilionoideae, Phaseoleae, pea family, soybean, soybeans
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