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GLYMA04G08854.1 protein (Glycine max) - STRING interaction network
"GLYMA04G08854.1" - Uncharacterized protein in Glycine max
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLYMA04G08854.1Uncharacterized protein (579 aa)    
Predicted Functional Partners:
GLYMA13G03820.1
Uncharacterized protein (303 aa)
           
  0.701
GLYMA20G37170.1
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7’ (570 aa)
           
  0.642
GLYMA10G30220.1
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7’ (570 aa)
           
  0.642
PDS1
Phytoene dehydrogenase, chloroplastic/chromoplastic; This enzyme converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11’ positions of phytoene; Belongs to the carotenoid/retinoid oxidoreductase family (570 aa)
           
  0.568
GLYMA11G36810.1
Uncharacterized protein (570 aa)
           
  0.568
GLYMA15G18810.1
Uncharacterized protein (533 aa)
     
   
  0.513
GLYMA09G07590.1
Uncharacterized protein (532 aa)
     
   
  0.513
GLYMA19G31220.1
Uncharacterized protein (507 aa)
           
  0.491
GLYMA03G28470.2
Uncharacterized protein (507 aa)
           
  0.491
GLYMA08G28391.1
Uncharacterized protein (165 aa)
   
     
  0.465
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max, Glycine max (L.) Merr., soybean, soybeans
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