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GLYMA04G21826.1 protein (Glycine max) - STRING interaction network
"GLYMA04G21826.1" - Uncharacterized protein in Glycine max
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLYMA04G21826.1Uncharacterized protein (209 aa)    
Predicted Functional Partners:
GLYMA08G25971.1
Uncharacterized protein (1279 aa)
     
 
  0.985
GLYMA11G04113.1
Uncharacterized protein (987 aa)
     
 
  0.969
GLYMA01G41301.1
Uncharacterized protein (392 aa)
     
 
  0.969
GLYMA11G20970.1
Uncharacterized protein (643 aa)
     
 
  0.968
GLYMA17G29031.1
Uncharacterized protein; DNA topoisomerase (677 aa)
     
 
  0.954
GLYMA17G29001.1
Uncharacterized protein (413 aa)
     
 
  0.954
GLYMA14G18300.1
Uncharacterized protein; DNA topoisomerase (1076 aa)
     
 
  0.954
TOP3A
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (913 aa)
     
 
  0.954
GLYMA18G00711.1
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (78 aa)
     
 
  0.950
GLYMA14G05945.1
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (105 aa)
     
 
  0.950
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max, Glycine max (L.) Merr., soybean, soybeans
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