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GLYMA04G41410.1 protein (Glycine max) - STRING interaction network
"GLYMA04G41410.1" - E3 ubiquitin-protein ligase in Glycine max
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLYMA04G41410.1E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin- conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates (323 aa)    
Predicted Functional Partners:
GLYMA19G15780.3
Uncharacterized protein; Belongs to the cytochrome b5 family (267 aa)
     
   
  0.829
GLYMA11G11490.1
Uncharacterized protein (1872 aa)
           
  0.763
GLYMA20G29660.1
Uncharacterized protein; Belongs to the cytochrome b5 family (225 aa)
     
   
  0.685
GLYMA16G31873.1
Uncharacterized protein; Belongs to the cytochrome b5 family (222 aa)
     
   
  0.685
GLYMA15G41780.1
Uncharacterized protein (107 aa)
     
   
  0.685
GLYMA10G38150.1
Uncharacterized protein; Belongs to the cytochrome b5 family (235 aa)
     
   
  0.685
GLYMA09G25940.1
Uncharacterized protein; Belongs to the cytochrome b5 family (220 aa)
     
   
  0.685
NAC35
Transcriptional factor NAC35; Uncharacterized protein (303 aa)
       
 
  0.637
NAC34
NAC transcription factor (302 aa)
       
 
  0.637
GLYMA20G36020.1
Uncharacterized protein; Ubiquitin carboxyl-terminal hydrolase ; Belongs to the peptidase C19 family (928 aa)
       
      0.574
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max, Glycine max (L.) Merr., soybean, soybeans
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