• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
GLYMA04G43360.2 protein (Glycine max) - STRING interaction network
"GLYMA04G43360.2" - Serine hydroxymethyltransferase in Glycine max
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLYMA04G43360.2Serine hydroxymethyltransferase; Interconversion of serine and glycine; Belongs to the SHMT family (543 aa)    
Predicted Functional Partners:
GLYMA11G25900.1
Uncharacterized protein (609 aa)
   
  0.958
GLYMA04G16670.1
Uncharacterized protein (605 aa)
   
  0.958
GLYMA17G01550.4
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family (407 aa)
 
  0.939
GLYMA12G04480.2
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (580 aa)
   
 
  0.935
GLYMA11G12280.2
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (618 aa)
   
 
  0.935
DHFR-TS
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism. Can play two different roles depending on the source of dihydrofolate- de novo synthesis of tetrahydrofolate or recycling of the dihydrofolate released as one of the end products of the TS catalyzed reaction. Catalyzes an essential reaction for de novo glycine and purine synthesis, DNA precursor synthesis, and for the conversion of dUMP to dTMP (By similarity) (568 aa)
   
 
  0.935
GLYMA04G01244.2
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (530 aa)
   
 
  0.935
GLYMA15G11590.1
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family (407 aa)
   
  0.920
GLYMA07G39190.1
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family (407 aa)
   
  0.920
GLYMA03G14660.1
Uncharacterized protein (124 aa)
   
 
  0.887
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max, Glycine max (L.) Merr., soybean, soybeans
Server load: low (10%) [HD]