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STRINGSTRING
GLYMA04G43380.2 protein (Glycine max) - STRING interaction network
"GLYMA04G43380.2" - Rhomboid-like protein in Glycine max
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLYMA04G43380.2Rhomboid-like protein (368 aa)    
Predicted Functional Partners:
GLYMA13G05340.1
Uncharacterized protein (458 aa)
       
 
  0.801
GLYMA10G02745.1
Uncharacterized protein (540 aa)
     
   
  0.777
GLYMA02G17050.1
annotation not available (531 aa)
     
   
  0.777
GLYMA12G05550.1
Uncharacterized protein (285 aa)
           
  0.691
GLYMA11G13550.1
Uncharacterized protein (271 aa)
           
  0.691
GLYMA17G04810.1
Uncharacterized protein (332 aa)
           
  0.673
GLYMA13G17700.1
Uncharacterized protein (322 aa)
           
  0.673
GLYMA17G08800.2
Uncharacterized protein (196 aa)
     
   
  0.649
GLYMA05G00250.1
Uncharacterized protein (336 aa)
     
   
  0.649
GLYMA19G39131.1
Uncharacterized protein (414 aa)
           
  0.635
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max, Glycine max (L.) Merr., soybean, soybeans
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