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STRINGSTRING
GLYMA05G00460.1 protein (Glycine max) - STRING interaction network
"GLYMA05G00460.1" - Histone deacetylase in Glycine max
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLYMA05G00460.1Histone deacetylase (656 aa)    
Predicted Functional Partners:
FLD
Flowering locus D (865 aa)
     
 
  0.850
GLYMA19G34340.1
Uncharacterized protein (540 aa)
     
 
  0.837
GLYMA03G31490.1
Uncharacterized protein (543 aa)
     
 
  0.837
GLYMA14G02561.1
Uncharacterized protein (812 aa)
   
 
  0.824
GLYMA02G46180.1
Uncharacterized protein (785 aa)
   
 
  0.824
GLYMA17G13050.1
Uncharacterized protein; Component of the post-replicative DNA mismatch repair system (MMR) (942 aa)
   
 
  0.818
GLYMA04G36101.1
Uncharacterized protein (197 aa)
     
 
  0.810
GLYMA16G25795.1
Uncharacterized protein (1496 aa)
   
 
  0.804
GLYMA11G06620.2
Uncharacterized protein (1445 aa)
   
 
  0.804
GLYMA02G06771.2
Uncharacterized protein (1494 aa)
   
 
  0.804
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max, Glycine max (L.) Merr., soybean, soybeans
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