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GLYMA05G04540.1 protein (Glycine max) - STRING interaction network
"GLYMA05G04540.1" - Autophagy-related protein in Glycine max
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLYMA05G04540.1Autophagy-related protein; Belongs to the ATG8 family (134 aa)    
Predicted Functional Partners:
GLYMA10G03560.2
Uncharacterized protein (3609 aa)
     
 
  0.990
GLYMA02G16260.1
Uncharacterized protein (3605 aa)
     
 
  0.990
GMATG7
Uncharacterized protein (686 aa)
     
  0.978
GLYMA17G09210.2
Uncharacterized protein (812 aa)
     
 
  0.977
GLYMA05G02631.1
Uncharacterized protein (878 aa)
     
 
  0.977
GMATG3A
Autophagy-related protein 3 (313 aa)
     
  0.970
GLYMA09G36540.1
Autophagy-related protein 3 (288 aa)
     
  0.970
GLYMA18G48380.1
Cysteine protease (485 aa)
     
  0.967
GLYMA09G38000.1
Cysteine protease (459 aa)
     
 
  0.922
ATG6
Uncharacterized protein (509 aa)
     
 
  0.906
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max, Glycine max (L.) Merr., soybean, soybeans
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