STRINGSTRING
LOC778094 protein (Glycine max) - STRING interaction network
"LOC778094" - Chloride channel in Glycine max
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC778094Chloride channel (773 aa)    
Predicted Functional Partners:
GLYMA18G04070.1
Uncharacterized protein (1391 aa)
         
  0.552
FGAM2
Phosphoribosylformylglycinamidine synthase (1410 aa)
         
  0.552
GLYMA19G27020.2
Chloride channel protein (563 aa)
     
   
  0.498
GLYMA14G00270.1
Uncharacterized protein (741 aa)
     
   
  0.498
GLYMA06G47910.1
Uncharacterized protein (765 aa)
     
   
  0.498
GLYMA04G12729.1
Chloride channel protein (736 aa)
     
   
  0.498
GLYMA02G48190.1
Uncharacterized protein (322 aa)
     
   
  0.498
GLYMA07G30970.1
Uncharacterized protein (377 aa)
   
        0.489
GLYMA15G43170.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1484 aa)
   
   
  0.446
GLYMA10G11610.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1459 aa)
   
   
  0.446
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: Fabaceae, Fabales, Faboideae, G. max, Glycine, Glycine max, Glycine max (L.) Merr., Leguminosae, Papilionoideae, Phaseoleae, pea family, soybean, soybeans
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