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STRINGSTRING
GLYMA05G23950.1 protein (Glycine max) - STRING interaction network
"GLYMA05G23950.1" - Pectate lyase in Glycine max
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLYMA05G23950.1Pectate lyase (404 aa)    
Predicted Functional Partners:
GLYMA16G01650.1
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin (492 aa)
 
   
  0.897
GLYMA15G23310.1
Uncharacterized protein (401 aa)
       
  0.894
GLYMA09G10500.1
Uncharacterized protein (394 aa)
       
  0.894
GLYMA07G05145.1
Uncharacterized protein; Pectinesterase (1185 aa)
       
  0.868
GLYMA20G02840.1
Uncharacterized protein (379 aa)
       
  0.850
GLYMA15G13360.1
Uncharacterized protein (408 aa)
       
  0.850
GLYMA09G02460.2
Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family (410 aa)
       
  0.850
GLYMA07G34990.2
Uncharacterized protein (333 aa)
       
  0.850
GLYMA03G24030.1
Uncharacterized protein (391 aa)
       
  0.850
GLYMA15G01250.2
Uncharacterized protein (508 aa)
         
  0.828
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max, Glycine max (L.) Merr., soybean, soybeans
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