Groups of genes that are frequently observed in each other's genomic neighborhood.
Co-purification, co-crystallization, Yeast2Hybrid, Genetic Interactions, etc ... as imported from primary sources.
Genes that are sometimes fused into single open reading frames.
Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
Proteins whose genes are observed to be correlated in expression, across a large number of experiments.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Polygalacturonase inhibiting protein; Uncharacterized protein (334 aa)
Predicted Functional Partners:
Polygalacturonase; Uncharacterized protein (440 aa)
Calnexin homolog; Calcium-binding protein that interacts with newly synthesized glycoproteins in the endoplasmic reticulum. It may act in assisting protein assembly and/or in the retention within the ER of unassembled protein subunits. It seems to play a major role in the quality control apparatus of the ER by the retention of incorrectly folded proteins (By similarity) (550 aa)
Uncharacterized protein (410 aa)
Uncharacterized protein (218 aa)
Uncharacterized protein (247 aa)
Uncharacterized protein (446 aa)
Major latex protein homolog; Uncharacterized protein (153 aa)
Uncharacterized protein (254 aa)
Uncharacterized protein (240 aa)
Uncharacterized protein (252 aa)
Your Current Organism:
NCBI taxonomy Id: 3847 Other names: G. max, Glycine max, Glycine max (L.) Merr., soybean, soybeans