STRINGSTRING
GLYMA05G27340.1 protein (Glycine max) - STRING interaction network
"GLYMA05G27340.1" - Uncharacterized protein in Glycine max
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLYMA05G27340.1Uncharacterized protein (621 aa)    
Predicted Functional Partners:
GLYMA12G17150.1
Uncharacterized protein (145 aa)
     
 
  0.812
GLYMA06G41210.1
Uncharacterized protein (145 aa)
     
 
  0.812
GLYMA08G23853.1
Uncharacterized protein (317 aa)
       
      0.810
GLYMA07G00560.3
Uncharacterized protein (350 aa)
       
      0.810
GLYMA18G25820.1
Uncharacterized protein (163 aa)
           
  0.799
GLYMA08G45810.1
Uncharacterized protein (165 aa)
           
  0.799
GLYMA19G28740.1
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1 (204 aa)
     
   
  0.775
GLYMA16G04570.1
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1 (195 aa)
     
   
  0.775
GLYMA20G36600.2
Uncharacterized protein (963 aa)
     
      0.571
GLYMA10G30870.1
Uncharacterized protein (962 aa)
     
      0.571
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max, Glycine max (L.) Merr., soybean, soybeans
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