STRINGSTRING
GLYMA05G34800.1 protein (Glycine max) - STRING interaction network
"GLYMA05G34800.1" - Pectinesterase in Glycine max
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLYMA05G34800.1Pectinesterase (521 aa)    
Predicted Functional Partners:
GLYMA15G23310.1
Uncharacterized protein (401 aa)
       
  0.896
GLYMA09G10500.1
Uncharacterized protein (394 aa)
       
  0.896
GLYMA01G18520.1
Uncharacterized protein (395 aa)
       
  0.896
GLYMA14G04850.1
Uncharacterized protein (402 aa)
       
  0.871
GLYMA08G40820.2
Pectate lyase (451 aa)
 
   
  0.751
GLYMA13G05150.1
Pectate lyase (443 aa)
 
   
  0.746
GLYMA09G00850.1
Pectate lyase (397 aa)
 
   
  0.742
GLYMA01G04970.1
Pectate lyase (448 aa)
 
   
  0.740
GLYMA02G02460.1
Pectate lyase (447 aa)
 
   
  0.739
GLYMA03G34260.1
Pectate lyase (470 aa)
 
   
  0.735
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max, Glycine max (L.) Merr., soybean, soybeans
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