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STRINGSTRING
GLYMA05G35310.1 protein (Glycine max) - STRING interaction network
"GLYMA05G35310.1" - Uncharacterized protein in Glycine max
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLYMA05G35310.1Uncharacterized protein (697 aa)    
Predicted Functional Partners:
GLYMA18G43154.1
Uncharacterized protein (493 aa)
           
  0.681
GLYMA12G11564.1
Uncharacterized protein (507 aa)
           
  0.681
GLYMA18G02900.1
Uncharacterized protein (857 aa)
           
  0.646
GLYMA11G35520.2
Uncharacterized protein (863 aa)
           
  0.646
GLYMA11G07720.1
Uncharacterized protein (693 aa)
     
   
  0.580
GLYMA01G37580.1
Uncharacterized protein (697 aa)
     
   
  0.580
GLYMA12G09600.3
Uncharacterized protein (115 aa)
           
  0.561
GLYMA11G18870.1
Uncharacterized protein (115 aa)
           
  0.561
GLYMA13G26861.1
Uncharacterized protein (368 aa)
           
  0.548
GLYMA10G02680.2
U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5’ splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5’ splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5’ splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5’ end of the U1 snRNA and the 5’ splice-site region (206 aa)
           
  0.544
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max, Glycine max (L.) Merr., soybean, soybeans
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