• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
GLYMA06G10555.1 protein (Glycine max) - STRING interaction network
"GLYMA06G10555.1" - Queuine tRNA-ribosyltransferase catalytic subunit 1 in Glycine max
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLYMA06G10555.1Queuine tRNA-ribosyltransferase catalytic subunit 1; Catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis- dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1’ of nucleotide 34 to detach the guanine base from the RNA, formi [...] (413 aa)    
Predicted Functional Partners:
GLYMA08G48310.1
Uncharacterized protein (99 aa)
   
 
  0.995
GLYMA13G10281.1
Queuine tRNA-ribosyltransferase accessory subunit 2; Non-catalytic subunit of the queuine tRNA- ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, - His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7- deazaguanosine); Belongs to the queuine tRNA-ribosyltransferase family. QTRT2 subfamily (401 aa)
   
 
0.959
GLYMA11G05250.1
Uncharacterized protein (305 aa)
   
   
  0.928
GLYMA01G40041.1
Uncharacterized protein (305 aa)
   
   
  0.928
GLYMA07G39030.1
Uncharacterized protein (1075 aa)
     
   
  0.858
GLYMA14G38255.1
Tyrosine--tRNA ligase (490 aa)
     
   
  0.818
GLYMA02G40060.2
Tyrosine--tRNA ligase (572 aa)
     
   
  0.818
GLYMA13G38830.1
Uncharacterized protein (412 aa)
   
   
  0.818
GLYMA06G17550.1
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil (381 aa)
   
   
  0.806
GLYMA10G43570.1
Elongator complex protein 1; Acts as subunit of the RNA polymerase II elongator complex, which is a histone acetyltransferase component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation (1314 aa)
     
   
  0.798
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max, Glycine max (L.) Merr., soybean, soybeans
Server load: low (7%) [HD]