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GLYMA06G12770.2 protein (Glycine max) - STRING interaction network
"GLYMA06G12770.2" - Transcription elongation factor SPT5 in Glycine max
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLYMA06G12770.2Transcription elongation factor SPT5 (1039 aa)    
Predicted Functional Partners:
GLYMA15G19450.1
Uncharacterized protein (1088 aa)
     
 
  0.989
GLYMA09G07980.1
Uncharacterized protein (1089 aa)
     
 
  0.989
GLYMA19G30560.1
Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII) (1649 aa)
     
 
  0.988
GLYMA06G46930.2
Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII) (1623 aa)
     
 
  0.988
GLYMA03G27590.1
Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII) (1663 aa)
     
 
  0.988
GLYMA07G40390.1
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex (116 aa)
     
 
  0.984
GLYMA15G37710.1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (2098 aa)
   
 
  0.970
GLYMA13G26691.2
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (2020 aa)
   
 
  0.970
GLYMA15G18790.1
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1193 aa)
     
 
  0.961
GLYMA15G08000.2
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1130 aa)
     
 
  0.961
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max, Glycine max (L.) Merr., soybean, soybeans
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