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GLYMA07G38110.1 protein (Glycine max) - STRING interaction network
"GLYMA07G38110.1" - CASP-like protein 7 in Glycine max
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLYMA07G38110.1CASP-like protein 7 ; Belongs to the Casparian strip membrane proteins (CASP) family (193 aa)    
Predicted Functional Partners:
GLYMA02G11280.1
Uncharacterized protein (242 aa)
           
  0.815
GLYMA01G22650.1
Uncharacterized protein (237 aa)
           
  0.815
GLYMA20G01530.2
Uncharacterized protein (198 aa)
     
   
  0.769
GLYMA08G09950.1
Uncharacterized protein (221 aa)
     
   
  0.769
GLYMA07G27950.1
annotation not available (213 aa)
     
   
  0.769
GLYMA05G26970.1
Uncharacterized protein (212 aa)
     
   
  0.769
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max, Glycine max (L.) Merr., soybean, soybeans
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